|
#155
|
When using `Projection.set/getWeights()` with arrays, the case of multiple connections between source and target is not consistently handled or tested
|
all
|
trunk
|
defect
|
|
new
|
02/03/10
|
|
#172
|
TsodyksMarkram Synapse - uses nest tsodyks_synapse but not tau_psc
|
nest
|
trunk
|
defect
|
apdavison
|
assigned
|
10/24/10
|
|
#192
|
Recording issue with multiple run() calls in NEST and to_file=True
|
Documentation
|
trunk
|
defect
|
|
new
|
05/04/11
|
|
#196
|
Error when using PyNN on Windows
|
neuron
|
trunk
|
defect
|
apdavison
|
new
|
09/01/11
|
|
#62
|
Draw dynamic synapses parameters from RNG Distributions
|
common
|
trunk
|
enhancement
|
pierre
|
new
|
04/03/08
|
|
#113
|
Add `Projection.record_weights()` or something similar
|
all
|
trunk
|
enhancement
|
apdavison
|
assigned
|
08/27/08
|
|
#137
|
Reimplement connectors in terms of arrays
|
common
|
trunk
|
enhancement
|
apdavison
|
new
|
06/05/09
|
|
#138
|
All issues of which connections are local should be dealt with within ConnectionManager, not in the Connectors
|
common
|
trunk
|
enhancement
|
apdavison
|
new
|
06/05/09
|
|
#153
|
A way to reset the list of things to record
|
common
|
trunk
|
enhancement
|
apdavison
|
assigned
|
01/26/10
|
|
#154
|
Implement `Population.record_gsyn()` method and `record_gsyn()` function in the `pcsim` module
|
pcsim
|
trunk
|
enhancement
|
apdavison
|
new
|
02/02/10
|
|
#161
|
Rethink the connectors as convergent_connect() and problems with set/getWeight
|
all
|
trunk
|
enhancement
|
|
new
|
03/26/10
|
|
#182
|
More comprehensive unit conversion for recorded variables
|
common
|
trunk
|
enhancement
|
apdavison
|
new
|
01/11/11
|
|
#183
|
Remove 'gsyn' as a valid recordable (replace with 'gsyn_e' and 'gsyn_i')
|
common
|
trunk
|
enhancement
|
apdavison
|
new
|
01/13/11
|
|
#189
|
printSpikes - number of decimal places
|
nest
|
trunk
|
enhancement
|
apdavison
|
new
|
02/18/11
|
|
#204
|
PyNN.music.Port[Pipe] for exposing e.g. Population 'spikes' or 'v' to music programs external to PyNN
|
music
|
trunk
|
enhancement
|
apdavison
|
new
|
11/23/11
|
|
#205
|
PyNN.proxy/model-container backend
|
music
|
trunk
|
enhancement
|
apdavison
|
new
|
11/23/11
|
|
#206
|
music ENV VAR syntax to delay port setup
|
music
|
trunk
|
enhancement
|
mdjurfeldt
|
new
|
11/23/11
|
|
#207
|
PyNN.music scheme for doing local backend specific non-PyNN api code
|
music
|
trunk
|
enhancement
|
apdavison
|
new
|
11/23/11
|
|
#209
|
PyNN music Projection class
|
music
|
trunk
|
enhancement
|
apdavison
|
new
|
11/24/11
|
|
#210
|
PyNN music setup() function
|
music
|
trunk
|
enhancement
|
apdavison
|
new
|
11/24/11
|
|
#211
|
PyNN music run() function
|
music
|
trunk
|
enhancement
|
apdavison
|
new
|
11/24/11
|
|
#2
|
Separate standard models into a membrane part and a synapse part
|
unspecified
|
trunk
|
task
|
somebody
|
new
|
04/24/07
|
|
#4
|
Any int or float cell or connection parameter should be replaceable by a RandomDistribution object, or by a list/array of ints/floats
|
unspecified
|
trunk
|
task
|
Pierre
|
new
|
04/24/07
|
|
#5
|
More sophisticated parameter handling
|
unspecified
|
trunk
|
task
|
somebody
|
new
|
04/24/07
|
|
#125
|
Update NMODL files in src/hoc to be thread-safe, where possible
|
nmodl
|
trunk
|
task
|
apdavison
|
assigned
|
01/27/09
|
|
#181
|
Update docstrings
|
Documentation
|
trunk
|
task
|
|
new
|
01/05/11
|
|
#208
|
Delayed setup + configuration API in MUSIC
|
music
|
trunk
|
task
|
mdjurfeldt
|
new
|
11/23/11
|
|
#51
|
More sophisticated error handling for writing to file
|
common
|
trunk
|
defect
|
apdavison
|
new
|
03/19/08
|
|
#165
|
Temporary files are not closed correctly by Recorder class
|
nest
|
trunk
|
defect
|
apdavison
|
new
|
05/21/10
|
|
#170
|
TsodyksMarkramMechanism in neuron fails for specific time constant values
|
neuron
|
trunk
|
defect
|
apdavison
|
assigned
|
09/13/10
|
|
#174
|
lost current sources due to NEURON Population.inject reference counting
|
neuron
|
trunk
|
defect
|
apdavison
|
new
|
11/04/10
|
|
#187
|
Where functions/methods take numerical values as arguments, ensure the docstring states the units
|
Documentation
|
trunk
|
defect
|
|
new
|
02/11/11
|
|
#190
|
reset simulator.state.default_recording_precision
|
nest
|
trunk
|
defect
|
apdavison
|
new
|
02/26/11
|
|
#201
|
Not all tests are correctly skipped when dependencies are not available.
|
test
|
trunk
|
defect
|
apdavison
|
new
|
11/16/11
|
|
#24
|
Implement user-specified output formats for spikes, etc
|
unspecified
|
trunk
|
enhancement
|
somebody
|
new
|
05/16/07
|
|
#35
|
Access to neuron variables via properties of the ID class
|
common
|
trunk
|
enhancement
|
apdavison
|
assigned
|
11/14/07
|
|
#65
|
Add a `get_simulator()` function
|
common
|
trunk
|
enhancement
|
apdavison
|
assigned
|
04/09/08
|
|
#69
|
Change `set(cells, params, val)` to `set(cells, **parameters)`
|
common
|
trunk
|
enhancement
|
apdavison
|
new
|
04/09/08
|
|
#114
|
`dummy` or `test` module to check argument types, etc in code before starting a time-consuming run
|
all
|
trunk
|
enhancement
|
apdavison
|
assigned
|
09/09/08
|
|
#132
|
The selection of dynamic synapse models that is done in `Projection.__init__()` would be better done in the `SynapseDynamics` class
|
all
|
trunk
|
enhancement
|
|
new
|
06/01/09
|
|
#133
|
Add functions `run_for()` and `run_until()`, with `run()` an alias for `run_for()`
|
all
|
trunk
|
enhancement
|
|
new
|
06/01/09
|
|
#139
|
Add a FromArrayConnector class
|
common
|
trunk
|
enhancement
|
apdavison
|
new
|
06/05/09
|
|
#142
|
When creating a Projection it is not clear how to define if it is a excitatory or inhibitory synapse (in the case of conductance based synapses)
|
all
|
trunk
|
enhancement
|
|
new
|
06/12/09
|
|
#175
|
When changing the resting membrane potential parameter, also change the default initial value
|
common
|
trunk
|
enhancement
|
apdavison
|
new
|
11/09/10
|
|
#212
|
Export PyNN script as NEST sli script
|
nest
|
trunk
|
enhancement
|
apdavison
|
new
|
11/29/11
|
|
#1
|
Combine print() and print_v() into a single write() that takes what-to-print as an argument
|
unspecified
|
trunk
|
task
|
apdavison
|
assigned
|
04/24/07
|
|
#8
|
Create NEURON/Brian versions of the IF_cond_exp_gsfa_grr model
|
nmodl
|
trunk
|
task
|
apdavison
|
assigned
|
04/24/07
|
|
#9
|
Add an Izhikevich standard model
|
unspecified
|
trunk
|
task
|
somebody
|
new
|
04/24/07
|
|
#10
|
Improve NEURON implementation of IF_curr_alpha, etc
|
nmodl
|
trunk
|
task
|
apdavison
|
new
|
04/24/07
|
|
#20
|
Performance benchmarks
|
unspecified
|
trunk
|
task
|
somebody
|
new
|
04/24/07
|
|
#54
|
Thoroughly test with native models
|
unspecified
|
trunk
|
task
|
apdavison
|
new
|
03/20/08
|
|
#67
|
Move the `max_delay` argument of `setup()` into `extra_params`, since not all simulators use it
|
common
|
trunk
|
task
|
apdavison
|
new
|
04/09/08
|
|
#73
|
Compatible output should save times in voltage files
|
common
|
trunk
|
task
|
apdavison
|
new
|
04/09/08
|
|
#200
|
setup(); run(0) advances time by 1 timestep
|
nest
|
trunk
|
defect
|
apdavison
|
new
|
11/16/11
|