|
|
|
@1053
|
[1053]
|
4 days |
pierre |
Patch to allow the user to use the accumulator mode of the new NEST …
|
|
|
|
@1049
|
[1049]
|
3 weeks |
pierre |
Fix a bug in the FastFromFile? connector
|
|
|
|
@1048
|
[1048]
|
3 weeks |
apdavison |
Assorted minor fixes
|
|
|
|
@1047
|
[1047]
|
3 weeks |
apdavison |
Internal renaming for better PEP8 compliance
|
|
|
|
@1046
|
[1046]
|
4 weeks |
apdavison |
A few small fixes.
|
|
|
|
@1045
|
[1045]
|
6 weeks |
pierre |
Add the FastSmallWorldConnector? for Brian, and update NEST docstring to …
|
|
|
|
@1044
|
[1044]
|
6 weeks |
pierre |
Update the tests in order to take into account Nemo (and dt can not be …
|
|
|
|
@1043
|
[1043]
|
6 weeks |
pierre |
cleaning the repository
|
|
|
|
@1042
|
[1042]
|
6 weeks |
pierre |
Add a new way of handling the CurrentSource? objects. Now everything is …
|
|
|
|
@1041
|
[1041]
|
7 weeks |
pierre |
Still some uniformisation of the docstrings accross synapses. Everything …
|
|
|
|
@1040
|
[1040]
|
7 weeks |
pierre |
Simplification of the individual cells.py files and unification of the …
|
|
|
|
@1039
|
[1039]
|
7 weeks |
apdavison |
Cleaning up the repository
|
|
|
|
@1038
|
[1038]
|
7 weeks |
apdavison |
Removed Population.cell property (replaced by all_cells, and …
|
|
|
|
@1037
|
[1037]
|
7 weeks |
apdavison |
Renamed Population.meanSpikeCount() to Population.mean_spike_count() …
|
|
|
|
@1036
|
[1036]
|
7 weeks |
apdavison |
Removed Population.randomInit(distr) method. Deprecated since 0.7, and …
|
|
|
|
@1035
|
[1035]
|
7 weeks |
pierre |
Fix a minor bug in the iterators of an Assembly object, such that …
|
|
|
|
@1029
|
[1029]
|
8 weeks |
pierre |
minors fixes
|
|
|
|
@1028
|
[1028]
|
2 months |
pierre |
Fix some bugs in Nemo in order to be able to run and stop a simulation …
|
|
|
|
@1027
|
[1027]
|
2 months |
pierre |
Fix some bugs in Nemo in order to be able to run and stop a simulation …
|
|
|
|
@1024
|
[1024]
|
2 months |
pierre |
Fix for ticket 199, to be compatible with the documentation
|
|
|
|
@1023
|
[1023]
|
2 months |
pierre |
Wrong commit, sorry, forgot the file fixed the padding issue in Nemo.
|
|
|
|
@1022
|
[1022]
|
2 months |
pierre |
Work with Dan and Andreas to fix last bugs in Brian and Nemo. For those …
|
|
|
|
@1021
|
[1021]
|
2 months |
pierre |
Fix the bug for setting the weights of a population
|
|
|
|
@1020
|
[1020]
|
2 months |
pierre |
Nemo, neuron, nest, brian are now giving similar results for VABenchmark, …
|
|
|
|
@1019
|
[1019]
|
2 months |
pierre |
Fix some minors bugs in the Brian backend. Note that there is a difference …
|
|
|
|
@1018
|
[1018]
|
2 months |
pierre |
Fix bugs in the NeMo? backend, results for VA benchmark are close to …
|
|
|
|
@1017
|
[1017]
|
2 months |
pierre |
The IF_curr_exp benchmark is almost passed for Nemo when dt=1ms, even if …
|
|
|
|
@1016
|
[1016]
|
2 months |
apdavison |
Added version of simpleRandomNetwork that uses CSA
|
|
|
|
@1015
|
[1015]
|
2 months |
apdavison |
Implemented (together with Jochen and Mikael) NEST-specific version of the …
|
|
|
|
@1014
|
[1014]
|
2 months |
pierre |
stupid bug in Nemo
|
|
|
|
@1013
|
[1013]
|
2 months |
pierre |
Start working with the new pyNN version since the common module is …
|
|
|
|
@1010
|
[1010]
|
2 months |
apdavison |
Starting to work again on nineml module
|
|
|
|
@1007
|
[1007]
|
3 months |
emuller |
Fix of problem in neuron _convergent_connect
|
|
|
|
@1004
|
[1004]
|
3 months |
apdavison |
Fixed a couple of bugs in nest/connectors.py
|
|
|
|
@1003
|
[1003]
|
3 months |
apdavison |
Removed _simulator attribute from Connector classes. The simulator …
|
|
|
|
@1002
|
[1002]
|
3 months |
apdavison |
Updated setup.py to take account of common now being a package, not a …
|
|
|
|
@1001
|
[1001]
|
3 months |
apdavison |
Trying to fix import error seen when running tests in Jenkins/Hudson? but …
|
|
|
|
@1000
|
[1000]
|
3 months |
apdavison |
No longer store a global reference to the current simulator module in …
|
|
|
|
@999
|
[999]
|
4 months |
apdavison |
Made common into a module, and split into common.populations, …
|
|
|
|
@998
|
[998]
|
4 months |
apdavison |
Removed ConnectionManager. Now that connect() returns a Projection, …
|
|
|
|
@997
|
[997]
|
4 months |
apdavison |
AbstractRNG is now a new-style class (ticket:194)
|
|
|
|
@993
|
[993]
|
4 months |
apdavison |
Fixed bug when using connect() with single cell IDs (ticket:195)
|
|
|
|
@991
|
[991]
|
4 months |
apdavison |
Allow modifying parameters of CurrentSource objects after creation in …
|
|
|
|
@990
|
[990]
|
5 months |
apdavison |
Started working on STDP network example
|
|
|
|
@989
|
[989]
|
5 months |
apdavison |
more on converting docs to Sphinx
|
|
|
|
@988
|
[988]
|
6 months |
apdavison |
Started Sphinxifying docs
|
|
|
|
@987
|
[987]
|
6 months |
emuller |
Fixes to NEST NineML code to update to latest python lib9ml API
|
|
|
|
@986
|
[986]
|
6 months |
mhull |
Nineml-NMODL package update
|
|
|
|
@985
|
[985]
|
7 months |
mhull |
[Fixed typo in previous commit]
|
|
|
|
@984
|
[984]
|
7 months |
mhull |
Adjust nrnivmodl call for NMODL building, so that
we can globally decided …
|
|
|
|
@983
|
[983]
|
7 months |
mhull |
Changes to pyNN-NEST to bring back-substituion into line with nineml
|
|
|
|
@982
|
[982]
|
7 months |
mhull |
Bring PyNN back-substitution into line with python nineml
|
|
|
|
@981
|
[981]
|
8 months |
mhull |
Changes to NineML files to bring into line with
commit r349 to NineML …
|
|
|
|
@980
|
[980]
|
8 months |
pierre |
Minor bug with non uniform nor clipped distribution when launched with …
|
|
|
|
@979
|
[979]
|
8 months |
pierre |
Minor bug when too small populations are launched in a parallel context
|
|
|
|
@978
|
[978]
|
8 months |
pierre |
Optimization in Brian. If only a sub population is recorded, then we do …
|
|
|
|
@977
|
[977]
|
8 months |
pierre |
Fix a bug when assemblies are launched in parallel and some population are …
|
|
|
|
@976
|
[976]
|
8 months |
mhull |
Chnages to nineml code, since 'bindings' have been renamed "alias'
|
|
|
|
@975
|
[975]
|
8 months |
emuller |
(oops forgot) -> re-enabling full build for NEST 9ML backend
|
|
|
|
@974
|
[974]
|
8 months |
emuller |
NEST 9ML prototype backend is working.
Most pressing issues are: NEST …
|
|
|
|
@973
|
[973]
|
8 months |
emuller |
Starting work on NineML support for NEST. Not working yet.
|
|
|
|
@972
|
[972]
|
8 months |
mhull |
Changes to pyNN.neuron so that when building from nineml, we add bindings …
|
|
|
|
@971
|
[971]
|
8 months |
emuller |
Integrating Mike Hull's code for joining based on a Model built of …
|
|
|
|
@970
|
[970]
|
8 months |
pierre |
Caching also the data in NEST when recorded from memory and not to file, …
|
|
|
|
@969
|
[969]
|
8 months |
apdavison |
Small fix in SynapseDynamics.describe()
|
|
|
|
@968
|
[968]
|
8 months |
apdavison |
NineMLCellType subclasses now have sorted synapse_types
|
|
|
|
@967
|
[967]
|
8 months |
apdavison |
Forgot that not only 9ML-generated synaptic mechanisms have `NetCon?.wcnt() …
|
|
|
|
@966
|
[966]
|
8 months |
emuller |
Moved python lib9ml nineml examples to be importable -> Adjusted PyNN …
|
|
|
|
@965
|
[965]
|
9 months |
apdavison |
neuron.nineml now ensures that common.simulator is set correctly
|
|
|
|
@964
|
[964]
|
9 months |
emuller |
Factoring out 9ML CG generic code from neuron backend in preparation for …
|
|
|
|
@963
|
[963]
|
9 months |
apdavison |
Backed-out unintended change to src/neuron/nineml.py made in r957
|
|
|
|
@962
|
[962]
|
9 months |
pierre |
Some patch in the Brian module when using Short term plasticity. Fix also …
|
|
|
|
@961
|
[961]
|
9 months |
pierre |
Fix for the to_file=False option in NEST. I had a fix also for this, since …
|
|
|
|
@960
|
[960]
|
9 months |
apdavison |
Bumped version number
|
|
|
|
@958
|
[958]
|
9 months |
apdavison |
renamed COPYING to LICENSE
|
|
|
|
@957
|
[957]
|
9 months |
apdavison |
Added copyright statements
|
|
|
|
@956
|
[956]
|
9 months |
pierre |
Fix due to a syntax error with nest.SetStatus?
|
|
|
|
@955
|
[955]
|
10 months |
apdavison |
Cell types specified in 9ML can now have multiple synaptic channels …
|
|
|
|
@954
|
[954]
|
10 months |
pierre |
Some confusions again in the commit. Re Sorry. Is there a way to delete …
|
|
|
|
@953
|
[953]
|
10 months |
pierre |
Some confusions in the commits. Sorry.
|
|
|
|
@952
|
[952]
|
10 months |
pierre |
Fix a bug with the allow_self_connection flag. In some wiring schemes, it …
|
|
|
|
@951
|
[951]
|
10 months |
pierre |
Fix a bug with the allow_self_connection flag. In some wiring schemes, it …
|
|
|
|
@950
|
[950]
|
10 months |
pierre |
Oups... forget by mistake an empty version of nineml.py... This empty file …
|
|
|
|
@949
|
[949]
|
10 months |
pierre |
Try to speed up the Nemo SpikeSourcePoisson? and SpikeSourceArray?. However, …
|
|
|
|
@948
|
[948]
|
10 months |
pierre |
Patch for the tsodyks markram implementation in nest. Note that we assume …
|
|
|
|
@947
|
[947]
|
10 months |
apdavison |
Getting neuron models described in the 9ML abstraction layer working with …
|
|
|
|
@946
|
[946]
|
10 months |
pierre |
Some work in the Nemo Backend
|
|
|
|
@945
|
[945]
|
10 months |
pierre |
stupid mistake…
|
|
|
|
@944
|
[944]
|
10 months |
pierre |
Speed up the initialization of Projections using Tsodyks Markram synapses …
|
|
|
|
@943
|
[943]
|
10 months |
apdavison |
Removed the load_mechanisms() function from neuron.simulator, since it …
|
|
|
|
@942
|
[942]
|
10 months |
apdavison |
Added the beginnings of support for NineML abstraction layer …
|
|
|
|
@941
|
[941]
|
11 months |
pierre |
Add a sample method to the Assembly object, and add the possibility, for …
|
|
|
|
@940
|
[940]
|
11 months |
apdavison |
Values are now written to text files with their full precision (difference …
|
|
|
|
@939
|
[939]
|
12 months |
pierre |
update in the NeMo? module, before trying it on a GPU. SpikeSourcePlayer? …
|
|
|
|
@938
|
[938]
|
12 months |
pierre |
Nemo improvements, fixes, bugs
|
|
|
|
@937
|
[937]
|
12 months |
pierre |
Nemo improvements, fixes, bugs
|
|
|
|
@936
|
[936]
|
12 months |
pierre |
Small fixes in the Nemo backend, need a *not available yet* version of the …
|
|
|
|
@935
|
[935]
|
12 months |
pierre |
Some fixes in the Nemo module, taking into account updates in the API, not …
|
|
|
|
@934
|
[934]
|
12 months |
apdavison |
Stupid oversight in the previous commit. That'll teach me to run all the …
|
|
|
|
@933
|
[933]
|
12 months |
apdavison |
Currently, any file opening errors encountered when creating a PyNN File …
|
|
|
|
